How can i simulate thermal comfort a traditional common building?

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Most software can simulate thermal comfort. I believe that they all refer to ASHRAE-55 standards for determining comfort within each space - EnergyPlus certainly does, and eQuest I'm pretty sure does as well. If you are not familiar with the ASHRAE-55 standard, that would be a good place to start as far as how thermal comfort is determined.

eQuest, EnergyPlus, OpenStudio and DesignBuilder interface) can all certainly meet your needs, and all will use weather files as appropriate for your region. You classify your space types as you desire - in your case, assigning stalls for sales cooking, and corridor space - including the effects of internal loads like lighting and equipment on the space.

Looking beyond which programs can simulate surface temperatures and thus calculate PMV, I would say the most critical factors in getting a good simulation of conditions in a bazaar are, in order of importance: (1) the large thermal mass effect of the goods, (2) the effective air-change rate of outdoor air, and (3) the internal heat gain (sensible and latent) of lights, equipment, and people. From my experience, most simulation programs have difficulties in replicating the thermal stability of large thermally-massive structures which bazaars would definitely be. From my experiences going through bazaars and medinas in several Middle Eastern countries, they seem to have their own distinct microclimates. I think if you were able to get the air temperature and maybe humidity profiles correct, the thermal comfort would naturally follow. When you think about it, since 99% of the "stuff" in a bazaar don't receive solar radiation and are also not thermally connected to the outdoor environment, their surface temperatures should be virtually the same as the air temperature.