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For an off-the-shelf option, DView is pretty good (free) hourly results viewer. Once you get all the output variables in a single CSV, you can open in DView and investigate by turning variables on/off in a variety of charting formats.
Compiling the results from multiple runs into a single file is likely going to involve some scripting of sorts (see Jason's answer). We regularly access the EnergyPlus SQL output file to extract hourly output data.